#!/usr/bin/env python """ Created on Thu Jul 16 15:08:27 2020 @author: Aloma Blanch """ # import numpy as np # import matplotlib.pyplot as plt # import matplotlib.ticker as mtick from tkinter import Tk # from tkinter.filedialog import askopenfilename, asksaveasfile, askdirectory from tkinter.filedialog import askdirectory # import pandas as pd # import tkinter as tk import os.path # from scipy.signal import find_peaks_cwt # from scipy import signal # import statistics # from fpdf import FPDF from functions import error_plot, periodicity, pressure, flow, inlet_flow_waveform, rcr, cycle from generatePDF import generatePDF # Selct dir Tk().withdraw() folder = askdirectory() project_folder = os.path.dirname(folder) project = os.path.basename(project_folder) save_path = folder+'/'+project+'-report' os.mkdir(save_path) save_pdf = save_path + '/' + project + '-report.pdf' # Read important parameters from - solver.inp file mylines = [] # Declare an empty list named mylines. with open (project_folder + '/solver.inp', 'rt') as myfile: # Open lorem.txt for reading text data. for myline in myfile: # For each line, stored as myline, mylines.append(myline) # add its contents to mylines. # Number of Timesteps - idx 3 # Idea: remove the text to extract the number, the text part will be the same no matter the simulation N_ts = int(mylines[3][20:-1]) # Time Step Size - idx 4 dt = float(mylines[4][16:-1]) # Residual criteria - idx 4 rc = float(mylines[26][18:-1]) # Imesteps between Restarts - idx 6 t_btw_rst = int(mylines[6][37:-1]) # Extracting Outlet Boundary Conditions from - rcrt.dat fle Rc_C_Rd = rcr(project_folder) # Extracting number of cycles and period of cardiac cycle (T_cyc,n_cyc) = cycle(folder,dt,save_path) # Cehcking convergency and periodicity error_plot(folder,dt,rc,save_path) txt1 = periodicity(project,folder,dt,T_cyc,n_cyc,save_path) # Pressure - Outlets (DBP,MBP,SBP,PP) = pressure(folder,N_ts,T_cyc,dt,n_cyc,save_path) # Flow Rate - Outlets (Q_avg) = flow(folder,N_ts,T_cyc,dt,n_cyc,save_path) # Inlet Flow Rate + and t saved txt2 = inlet_flow_waveform(project_folder,t_btw_rst,N_ts,dt,T_cyc,n_cyc,save_path) # Create PDF report generatePDF(save_path,project,DBP,MBP,SBP,PP,Q_avg,txt1,txt2,Rc_C_Rd)